CDS
| Accession Number | TCMCG051C10918 |
| gbkey | CDS |
| Protein Id | XP_002304405.3 |
| Location | complement(join(13242828..13242947,13243131..13243205,13243596..13243821,13243978..13244066,13244141..13244234,13244443..13244627,13244706..13244873,13244948..13245088,13245377..13245595,13245730..13245846,13246345..13246441,13246625..13246716,13246981..13247043,13247268..13247327,13247409..13247573,13247659..13247844,13247935..13248225,13248338..13248481,13248644..13249324,13249892..13250209)) |
| Gene | LOC7479194 |
| GeneID | 7479194 |
| Organism | Populus trichocarpa |
Protein
| Length | 1176aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA17973 |
| db_source | XM_002304369.3 |
| Definition | structural maintenance of chromosomes protein 2-1 isoform X1 [Populus trichocarpa] |
EGGNOG-MAPPER Annotation
| COG_category | BD |
| Description | Structural maintenance of chromosomes protein |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K06674
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko04111
[VIEW IN KEGG] map04111 [VIEW IN KEGG] |
| GOs |
GO:0000793
[VIEW IN EMBL-EBI] GO:0000796 [VIEW IN EMBL-EBI] GO:0003674 [VIEW IN EMBL-EBI] GO:0005215 [VIEW IN EMBL-EBI] GO:0005575 [VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005694 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043228 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043232 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044427 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0044815 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGTATATAAAGGAGATATGTTTAGAGGGGTTCAAATCTTACGCAACAAGAACAGTAGTACAAGGATTCGACCCCTTTTTCAATGCAATTACGGGGCTAAATGGGTCTGGCAAGTCGAATATTCTGGATTCAATTTGTTTTGTTTTGGGTATAACTAATTTGCAGCAAGTTAGGGCATCCAATTTGCAGGAGTTAGTGTACAAGCAAGGACAGGCAGGGATTACTAAAGCTACAGTGTCAATTGTGTTTGATAATTCTGACAGGAATAGGAGTCCTCTTGGGTATGAAGATCATTCAGAGATTACAGTTACTAGACAGATTGTGGTCGGTGGAAGGAACAAGTATCTGATCAATGGAAAGCTGGCCCAGCCTAGTCAAGTCCAAAACCTTTTTCATTCAGTGCAGCTGAATGTTAACAATCCACATTTTCTCATTATGCAAGGACGCATTACTAAGGTCTTGAACATGAAACCTCCAGAGATCTTATCAATGCTTGAAGAGGCTGCTGGGACAAGAATGTACGAGACAAAAAAAGAGTCTGCGTTGAAAACTCTAGAGAAGAAGCAGAGCAAGGTGGATGAAATTAATAAGCTTCTTGACCAGGAGATACTGCCAGCTTTGGAGAAATTGAGGAAGGAGAGGATGCAATATATGCAATGGGCCAACGGCAATTCTGAATTAGATCGACTCAAAAGGTTTTGCATTGCTTATGATTATGTTCAAGCAGTGAAAATTAGAGACAGCGCAGTTGTTGAGGTGGAACATATGAAGGGAAAAATTGCTGTGATCGACACTAGTGCAGAACAGATGCTGGTGGAAATACAGCAAAAGGAGACGGAAATATCAAAATTGGCTGCTGAAAAGGAAGCCAGTATGGGCGGGGAAGTAAAAACTCTGTCAGAGAACGTAGATGTGCTTGCTCAAGATCTTGTGCGAGAGGTATCGGTTTTGAATAATAAAGAGGATACTTTAAGGAGTGAATGTGAGAGTGCTGAAAAGATTGTTCACAGTATTGAAGACTTAAAGCAGTCTGTTGAGGAGAGGGCTGCTGCAGTTAAAAAGTCTGAGGAAGGAGCAGCTGATCTCAAAAGGAGAGTTGGAGAACTTTACAATAGTTTGGAAAACTATGAGAAGGAATACCAAGGTGTGCTAGCTGGGAAGAGCAGTGGTAGTGAGGAGAAATGCCTTGAAGATCAACTGGGTGAAGCAAAGTATGCTGTTGGAAATGCCGAAACAGAGTTGAAACAGTTGAAAACAAAAATTAGCCATTGTGAGAAAGAGCTGAAAGAGAAAACGCATCAGTTAATGTCAAAGAATGAAGAAGCTGTTGCTGTAGAGAATGAGCTTAGTGCTAGAAGGAAAGATGTCGAAAATGCTAAATCAGCGCTGGAATCTCTTTCATATAAGGAAGGCCAGATGGAAGCTTTACAGAAGGATTGTGCATCCGAATTGAAACTATTGCAGAAGTTGAAAGATGAAATACGAGACCTTTCGGCGCAGCTATCAAATGTTCAATTCATATACCGTGATCCCGTGAGAAACTTTGATAGGTCGAAAGTAAAAGGCGTGGTAGCTAAACTAATTAAAGTAAATGACAGCTCCACAATGACTGCCCTAGAGGTTACTGCAGGTGGAAAGTTATTTAATGTTGTTGTGGACACTGAGAGCACTGGAAAGCAACTTCTTCAAAATGGTGATCTCCGTAGAAGAGTGACAATTATCCCCTTAAACAAAATTCAATCCCATACTGTACCCATTAGAGTTCAGCAGGCTGCTGTTAGATTGGTTGGCAAGGAGAATGCTGAACTGGCACTTACTTTGGTTGGCTACGATGAGGAATTGAAGACTGCTATGGAATATGTTTTTGGTTCAACATTTGTTTGCAAAAACATTGACGCTGCAAAGGAGGTTGCTTTTAGTCGAGAAATCCGCACTCCTAGTGTCACTCTTGAAGGCGATATCTTCCAGCCAAGTGGTCTTTTAACTGGTGGAAGTCGCAAGGGTGGTGGCGATCTGTTAAGGCAACTCCATGAATTGGCAGAGGCTGAATCAAATCTCACACTACATCAGAGAAGGTTATCTGAAATAGAAGCAAAGATTACAGAGCTCTTGCCGGTCCATAAAAAGTTTGCGGACCTTAAAAAGCAGTTAGAGCTTAAGCTGTATGATCTTTCATTATTTCAGGGCAGGGCTGAGCAAAACGAGCATCATAAGCTTGGAGAAGTAGTAAAGAAGATTGAACAAGAGCTTGAAGAAGCAAAGTCTGCAGTCAAAGAAAAACAAATTTTGTACAATGAGTGTGTTAATACAGTGTCAATGCTTGAAAAATCTATCAAAGAGCACGATAATAATCGAGAAGGCAAGCTTAAAGACTTGGAGAAACAAATTAAGGCTACAAAAGCACAAATGCAGTCAGTTTCAAAGGACCTCAAGGGGCATGAAAATGAAAGGGAGAGACTTATCATGGAACAGGAAGCAGTCATGAAGGAACATGCATCTTTGGAGAGTCAATTAGGTGCTTTGAGAGCACAAATCAGCTGTCTCAATTTGGAATTAGAAGAACAAAAGGCCAAGGTTGCTTCCACGCGCAATAATCATGATCAGGTTCAATCTGAGCTCAATGCAATCCGTCTAAAGATGAAGGAGCGTGATTCCCAAATTAGTAGCATTCTCAAGGAGCAGCAAAAACTTCAACATAAACTGAGTGAGACTAAGCTTGACAGGAAGAAGTTGGAGAATGAGGTGAAGAGAATGGAAATGGAGCAGAAAGATTGCTCTATGAAGGTGGACAAATTGATAGAGAAGCATACCTGGATTGCTTCTGAGAAGCAGCTATTTGGGAGAAGTGGGACTGATTATGATTTTCTGTCACTCAATCCTAGTAAAGCAAAGGAGGAACTTGAGAAATTGCAAGCAGAGCAATCAGGGCTCGAGAAAAGGGTGAACAAGAAAGTTATGGCAATGTTTGAAAAAGCAGAAGACGAGTACAACGATTTGATGTCAAAGAAGAACATCATAGAGAATGACAAGTCTAAAATAAATAAAGTGATTGAAGAGCTAGACGAGAAGAAGAAGGAGACTCTCAAAGTTACTTGGGTTAAAGTGAATAATGACTTTGGATCTATCTTTTCCACCTTATTGCCGGGCACCATGGCAAAGCTAGAACCTCCCGAAGGTTGCAGTTTCCTAGATGGTCTTGAGGTTCGTGTTGCTTTTGGAGGTGTCTGGAAACAATCGCTGTCTGAATTAAGTGGAGGTCAACGCTCTCTGCTTGCTTTATCTATAATCTTGGCATTACTTCTCTTCAAGCCAGCTCCACTTTATATTCTAGATGAGGTCGATGCGGCTCTTGACTTAAGCCACACACAGAACATAGGGAGAATGATCAAAACTCACTTCCCACACTCCCAGTTTATCGTGGTTTCACTAAAAGAAGGCATGTTCAACAATGCTAATGTTCTTTTCCGGACAAAATTTGTGGATGGTGTTTCCACTGTACAGAGGACTGTTGCCGCTAAGCAGAACTTGTGA |
| Protein: MYIKEICLEGFKSYATRTVVQGFDPFFNAITGLNGSGKSNILDSICFVLGITNLQQVRASNLQELVYKQGQAGITKATVSIVFDNSDRNRSPLGYEDHSEITVTRQIVVGGRNKYLINGKLAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKESALKTLEKKQSKVDEINKLLDQEILPALEKLRKERMQYMQWANGNSELDRLKRFCIAYDYVQAVKIRDSAVVEVEHMKGKIAVIDTSAEQMLVEIQQKETEISKLAAEKEASMGGEVKTLSENVDVLAQDLVREVSVLNNKEDTLRSECESAEKIVHSIEDLKQSVEERAAAVKKSEEGAADLKRRVGELYNSLENYEKEYQGVLAGKSSGSEEKCLEDQLGEAKYAVGNAETELKQLKTKISHCEKELKEKTHQLMSKNEEAVAVENELSARRKDVENAKSALESLSYKEGQMEALQKDCASELKLLQKLKDEIRDLSAQLSNVQFIYRDPVRNFDRSKVKGVVAKLIKVNDSSTMTALEVTAGGKLFNVVVDTESTGKQLLQNGDLRRRVTIIPLNKIQSHTVPIRVQQAAVRLVGKENAELALTLVGYDEELKTAMEYVFGSTFVCKNIDAAKEVAFSREIRTPSVTLEGDIFQPSGLLTGGSRKGGGDLLRQLHELAEAESNLTLHQRRLSEIEAKITELLPVHKKFADLKKQLELKLYDLSLFQGRAEQNEHHKLGEVVKKIEQELEEAKSAVKEKQILYNECVNTVSMLEKSIKEHDNNREGKLKDLEKQIKATKAQMQSVSKDLKGHENERERLIMEQEAVMKEHASLESQLGALRAQISCLNLELEEQKAKVASTRNNHDQVQSELNAIRLKMKERDSQISSILKEQQKLQHKLSETKLDRKKLENEVKRMEMEQKDCSMKVDKLIEKHTWIASEKQLFGRSGTDYDFLSLNPSKAKEELEKLQAEQSGLEKRVNKKVMAMFEKAEDEYNDLMSKKNIIENDKSKINKVIEELDEKKKETLKVTWVKVNNDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGGVWKQSLSELSGGQRSLLALSIILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKTHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVAAKQNL |